Projects

The Caleydo project consists of three main parts: the Framework, Genetical Data Analysis and Clinical Data Analysis

	Caleydo Visualization Framework The framework provides the core functionality for the other projects. It provides data handling, event management and view management. Through its architecture it supports a rapid prototyping approach when creating and integrating new visualizations.
	Gene Expression Analysis The Gene Expression Analysis is concerned with the visual analysis of gene expression regulation data, as is retrieved from microarray experiments. We incorporate and enhance modern InfoVis techniques to present the data and to augment the information in pathways.
	Pathway Exploration The Pathway Exploration project tries to facilitate the understanding of pathways, which are graphs that model biological processes. These pathways are hand-crafted and therefore have a good layout, but are hard to navigate. With this project we try to overcome this limitation.
	Clinical Data Analysis Caleydo aims to integrate clinical data into the analysis process, since only clinical data can provide crucial information about patient histories and backgrounds. The clinical data analysis is a current research focus, but is not yet part of any Caleydo releases.

Open Student Projects

As Master's Project / Master's Thesis / Bachelor's Thesis / Seminar Project	Visualizing Clusters in Parallel Coordinates
As Master's Project / Master's Thesis / Bachelor's Thesis / Seminar Project	Caleydo: Visualizing Uncertainty in Molecular Biology Data
As Master's Project / Master's Thesis / Seminar Project	Extended Cross Application Visual Links
As Master's Project / Master's Thesis / Seminar Project	Animated Pathway Simulation
As Bachelor's Thesis / Seminar Project	Creating a System Checker

Other project topics are available on demand. If you are interested please contact Marc Streit or Alexander Lex

Since Oct. 2010

Thomas Geymayer

Filter Pipeline Visualization

Bachelor's Thesis

Feb. 2010 - Jan. 2011	Hannes Plank	Eye-Controlled View Management	Bachelor's Thesis
Feb. - Dec. 2010	Michael Kerber	Eye-Controlled Game	Bachelor's Thesis
April - Dec. 2010	Michael Lafer	Visualizing a Cluster Hierarchy using a Treemap	Bachelor's Thesis
Oct. 2009 - Sept. 2010	Jürgen Pillhofer	Integrating a Scatter Plot Visualization	Master's Thesis
Oct. 2009 - May 2010	Christian Partl	Comparative Analysis	Master's Project
Oct. 2009 - May 2010	Michael Wittmayer	Visual Links in a 2D/3D Information Visualization System	Bachelor's Thesis
Apr.-Dec. 2009	Oliver Pimas	Visual Links in a 2D/3D Information Visualization System	Bachelor's Thesis
March.-Dec. 2009	Helmut Pichlhöfer	Visualizing Dependencies between Pathway Graphs	Bachelor's Thesis
Feb.-Dec. 2009	Bernhard Schlegl	Visual Analytics for gene expression data	Master's Thesis
Feb.-Dec. 2009	Werner Puff	Collaborative Information Visualization in a Multi-Desktop Environment	Master's Thesis
March-Oct. 2009	Christian Partl	Visualizing a Cluster Hierarchy using a Radial Layout	Bachelor's Thesis
July 2008 - June 2009	Stefan Sauer	Visualization of Patient Data using Glyphs	Bacherlor's Thesis
Oct. 2008 - Feb. 2009	Bernhard Schlegl	Multi Level Information Visualization for Large Data Sets with Heat Maps.	Master's Project