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- Info
Marc Streit
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Function: Scientific and Teaching Assistant (Universitätsassistent)
Email: streit(at)icg.tugraz.at - GPG key
Phone: +43 316 873-5064
Address: Inffeldgasse 16/II, 8010 Graz, Austria
Office: Room IE02170
Marc Streit received a M.Sc. in Computer Science from the Graz University of Technology in 2007. He is currently a research and teaching assistant in the team of Prof. Schmalstieg at the Institute for Computer Graphics and Vision at the Graz University of Technology. He works on his PhD-Thesis within the field of Information Visualization, Visual Analytics and Bioinformatics. His research is focused on the Caleydo project which aims to visualize biomolecular data to help life science experts to understand the function of genes.
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Publications | Teaching and Student Supervision | Curriculum Vitae | Projects | Research Interests | Other Stuff
Reviewed and Invited Publications
- Alexander Lex, Marc Streit, Christian Partl, Karl Kashofer, Dieter Schmalstieg:
Comparative Analysis of Multidimensional Quantitative Data
To appear in: IEEE Transactions on Visualization and Computer Graphics (Proc. InfoVis 2010, Salt Lake City, USA), 2010.

- Marc Streit, Alexander Lex, Helmut Doleisch, Dieter Schmalstieg:
Does software engineering pay off for research? Lessons learned from the Caleydo project
Poster at the Eurographics Workshop on Visual Computing for Biomedicine 2010, Leipzig, Germany, July 2010.

- Manuela Waldner, Werner Puff, Alexander Lex, Marc Streit, Dieter Schmalstieg:
Visual Links across Applications - Best student paper award
To appear in: Proceedings of the Graphics Interface (GI) 2010, Ottawa, Ontario, Canada, May 31 - June 2 2010.

- Alexander Lex, Marc Streit, Ernst Kruijff, Dieter Schmalstieg:
Caleydo: Design and Evaluation of a Visual Analysis Framework for Gene Expression Data in its Biological Context
Proceedings of the IEEE Pacific Visualization Symposium, pp. 57-64,Taipei, Taiwan, March 2010.

- Marc Streit, Alexander Lex, Michael Kalkusch, Kurt Zatloukal, Dieter Schmalstieg:
Caleydo: Connecting Pathways and Gene Expression
Bioinformatics, Oxford Journals, 25(20), pp. 2760-2761, 2009.

- Marc Streit, Hans-Joerg Schulz, Dieter Schmalstieg, Heidrun Schumann:
Towards Multi-User Multi-Level Interaction
Proceedings of the CoVIS 2009 Workshop on Collaborative Visualization on Interactive Surfaces (IEEE VisWeek), Atlantic City, USA, October 2009.

- Manuela Waldner, Alexander Lex, Marc Streit, Dieter Schmalstieg:
Design Considerations for Collaborative Information Workspaces in Multi-Display Environments
Proceedings of the CoVIS 2009 Workshop on Collaborative Visualization on Interactive Surfaces (IEEE VisWeek), Atlantic City, USA, October 2009.

- Heimo Müller, Robert Reihs, Stefan Sauer, Kurt Zatloukal,
Marc Streit, Alexander Lex, Bernhard Schlegl, Dieter Schmalstieg:
Connecting Genes with Diseases Symposium on Information Visualization in Biomedical
Informatics, 13th International Conference on Information
Visualization (IV'08), Barcelona, Spain, July 2009.

- Marc Streit, Alexander Lex, Heimo Müller, Dieter Schmalstieg:
Gaze-Based Focus Adaption in an Information Visualization System
Computer Graphics and Visualization and Image Processing
2009 Conference (CGVCVIP), Algarve, Portugal, June 2009.

- Gudrun Schmidt-Gann, Katharina Schmid, Monika Uehlein,
Joachim Struck, Andreas Bergmann,
Dieter Schmalstieg, Marc Streit, Alexander Lex, Douw G. van der Nest,
Martijn van Griensven and Heinz Redl:
Gene- and Protein Expression Profiling in Liver in a
Sepsis-Baboon Model
32nd Annual Meeting on Shock, San Antonio, Texas, June 6-9, 2009.

- Marc Streit, Michael Kalkusch, Karl Kashofer, Dieter
Schmalstieg:
Navigation and Exploration of Interconnected Pathways
Computer Graphics Forum, Volume 27, Number 3, pp.
951-958(8), May 2008.

- Heimo Müller, Kurt Zatloukal, Marc Streit, Dieter
Schmalstieg:
Interactive Exploration of Medical Data Sets
Symposium on Information Visualization in Biomedical Informatics, 12th
International Conference on Information Visualization (IV'09), London, UK,
July 2008.

- Marc Streit, Michael Kalkusch, Dieter Schmalstieg:
Interactive Visualization of Metabolic Pathways
In Proceedings of IEEE Visualization Poster Companion, Sacramento, USA, November 2007.

- Rupert C. Ecker, Radu Rogojanu, Marc Streit, Katja
Oesterreicher, Georg E. Steiner:
An improved method for discrimination of cell populations in tissue
sections using microscopy-based multicolor tissue cytometry
Journal of Cytometry Part A, Volume 69A, Issue 3, pp. 119-123, March 2006.

- Marc Streit, Rupert C. Ecker, Katja Österreicher, Georg E.
Steiner, Horst Bischof, Christine Bangert, Tamara Kopp, Radu Rogojanu:
3D parallel coordinate systems - A new data visualization method in
the context of microscopy-based multicolor tissue cytometry
Journal of Cytometry Part A, Volume 69A, Issue 7, pp. 601-611, July 2006.

Posters
- Marc Streit, Alexander Lex, Dieter Schmalstieg, Heimo
Mueller, Stefan Sauer, Wilhelm Steiner, Kurt Zatloukal:
CALEYDO
ZMF.Day (Center for Medical Research) 2008, Graz, Austria, November
12, 2008.
- Manuela Waldner, Christian Pirchheim, Marc Streit, Dieter
Schmalstieg:
Multiple
View Visualization On A Multi Display Setup
International Workshop on Giga-Pixel Displays & Visual Analytics
(GIANT), Leeds UK, April 2008.
Other Publications
Thesis Papers
Talks
| 01.07.2010 |
Invited talk at the Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM), Leipzig, Germany
Caleydo: Visual Analysis of Biomolecular Data |
| 11.03.2010 |
Invited talk at the VRVis Research Company, Vienna, Austria
Caleydo and Visual Links |
| 11.10.2009 |
CoVIS Workshop on Collaborative Visualization on Interactive Surfaces (IEEE VisWeek), Atlantic City, USA
Towards Multi-User Multi-Level Interaction |
| 08.07.2009 |
Research Training Group dIEM oSiRiS, Rostock, Germany
Connecting Genes With Diseases - A Holistic Approach |
| 07.07.2009 |
Visual Computing and Computer Graphics department at the University of Rostock, Germany
Caleydo Project Overview |
| 20.06.2009 |
Computer Graphics and Visualization and Image Processing
2009 Conference (CGVCVIP), Algarve, Portugal
Gaze-Based Focus Adaption in an Information Visualization
System |
| 26.02.2009 |
Invited talk at the AUVA
Research Center for Traumatology, Vienna, Austria
Caleydo: Visualization of Gene Expression Data in the Context
of Biological Processes |
| 01.10.2008 |
Welcome Day at the Graz University of Technology, Austria
Experiences of a graduate |
| 10.07.2008 |
Invited talk at the Institute for Genomics and
Bioinformatics, Graz University of Technoloy, Austria
Novel InfoVis Techniques Applied to Pathways and Gene
Expression Data |
| 27.05.2008 |
EuroVis, Eindhoven, Netherlands
Navigation and Exploration of Interconnected Pathways |
| 27.03.2008 |
Open House at the Graz University of Technology, Austria
Experiences of a graduate |
| 11.10.2007 |
Welcome Day at the Graz University of Technology, Austria
Experiences of a graduate |
Exhibitions
- Marc Streit, Alexander Lex, Dieter Schmalstieg, Heimo
Mueller, Kurt Zatloukal:
FWF Austrian Science Fund 40-Year Anniversary
Graz, Austria, December 2008 - January 2009.
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Courses
| Since 2009 |
Computer Graphics - Selected Topics |
Lecture & lab |
Winter term |
| Since 2009 |
Distributed Systems |
Lab part |
Winter term |
| Since 2009 |
Accompanying course for project students |
Lecture |
Winter & summer term |
| Since 2009 |
Computer Graphics 1 |
Lab part |
Summer term |
| Since 2009 |
Computer Graphics 2 |
Lab part |
Summer term |
| Since 2008 |
Real-time Graphics |
Lab part |
Winter term |
| Since 2007 |
Virtual Reality |
Lab part |
Summer term |
Student Supervision
Open Student Projects
Ongoing Student Projects
| Since Feb. 2010 |
Bachelor's Thesis |
Eye-Controlled Game
by Michael Kerber |
| Since April 2010 |
Bachelor's Thesis |
Cluster Visualization using Treemaps
by Michael Lafer |
| Since Feb. 2010 |
Bachelor's Thesis |
Eye-Controlled View Management
by Hannes Plank |
| Since Nov. 2009 |
Master's Thesis |
Caleydo: Integrating a Scatter Plot Visualization
by Jürgen Pillhofer |
| Since March 2009 |
Bachelor's Thesis |
Visual Links in a 2D/3D Information Visualization System
by Oliver Pimas |
Finished Student Projects
| Oct. 2009 - March 2010 |
Master's Project |
Comparative Analysis
by Christian Partl |
| March 2009 - Jan. 2010 |
Bachelor's Thesis |
Visualizing Dependencies between Pathway Graphs
by Helmut Pichlhöfer |
| Feb. 2009 - Jan. 2010 |
Master's Thesis |
Visual Analytics for Gene Expression Data
by Bernhard Schlegl |
| Feb. 2009 - Dec. 2009 |
Master's Thesis |
Collaborative Information Visualization in a
Multi-Desktop Environment
by Werner Puff |
| March 2009 - Nov. 2009 |
Bachelor's Thesis |
Visualizing a Cluster Hierarchy using a Radial
Layout
by Christian Partl |
| Oct. 2008 - Feb. 2009 |
Master's Project |
Multi-Level Information Visualization for Large Data
Sets with Heat Maps
by Bernhard Schlegl |
| July 2008 - June 2009 |
Bachelor's Thesis |
Visualization of Patient Data using Glyphs
by Stefan Sauer |
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Bernhard Schlegl - 2009
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| Christian Partl - 2009 |
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Date of birth: February 26th, 1983
Place of birth: Klagenfurt, Austria
Nationality: Austrian
Education
| Since August 2009 |
Associated PhD student in the Research Training Group dIEM oSiRiS, University of Rostock, Germany
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| July - August 2009 |
Visiting researcher at the Rostock University of Technology
in the Research Training Group dIEM oSiRiS
under the supervision of Prof. Heidrun Schumann and Prof. Adelinde Uhrmacher |
| Since July 2007 |
Doctoral program (PhD) in computer science at the Graz University of Technology
Supervision: Prof.
Dieter Schmalstieg and Prof. Heidrun Schumann |
| June 2007 |
Master's degree (Dipl.-Ing.) from the Graz University of Technology with highest distinction |
| 2006 - 2007 |
Master's studies in Computer Science at the Graz University of Technology |
| July 2006 |
Bachelor's degree (Bakk. rer. soc. oec) from the Graz University of Technology |
| 2002 - 2006 |
Bachelor studies in Software Engineering and Management at the Graz University of Technology |
| 2002 |
Graduation from the HTBLA Moessingerstraße with highest
distinction |
| 1997 - 2002 |
Engineering school (Hoehere Technische Bundeslehranstalt)
HTBLA Klagenfurt Moessingerstraße |
| 1993 - 1997 |
Secondary school (Gymnasium) at the Bundesgymnasium
Klagenfurt Moessingerstraße |
| 1989 - 1993 |
Primary school (Volksschule) at the Paedagogische Akademie
Klagenfurt |
Professional
| Since Oct. 2008 |
Faculty member (Universitätsassistent) at the Graz University of Technology |
| Since July 2007 |
Research assistant at the Institute for Computer Graphics
and Vision (Graz University of Technology) |
| 2004 - 2006 |
Part-time work for TissueGnostics GmbH (BioTech) |
Research, Programming, Quality Management, Project
Management |
| 2002 - 2004 |
HWS-OTC Service GmbH |
Webdesign, IT-Consulting |
| 2001, 2002 |
Internship at Systems@Work |
Customer Service, Programming, Network Administration |
| 2000 |
Internship at MPÖ Peter Seidel GmbH |
Computer Network Administration |
Stipends, achievements, project grants
| 2010 |
Co-recipient of Best Student Paper Award, ACM Graphics Interface, 2010. |
| 2009 |
"InGeneIous - Visualization of biomolecular and clinical data". Funded by FFG, BRIDGE program, 2009. |
| 2009 |
Scholarship for short time academic research and expert courses abroad (KUWI)
granted by the Graz University of Technology |
| 2006 |
Award for excellent performance as a student (Leistungsstipendium)
granted by the Faculty of Computer Science, Graz University of
Technology |
| 2006 |
Research grant for students (Förderstipendium)
awarded by the Faculty of Computer Science, Graz University of
Technology |
Scientific Activities
Conference Functions
- Program committee member of the International Conference on Information Visualisation (IV) 2010
- Program committee member of the Central European Seminar on Computer Graphics (CESCG) 2010
Reviewing for
- IEEE InfoVis 2010
- IEEE VAST 2010
- EuroVis 2010
- IEEE PacificVis 2010
- IEEE Virtual Reality 2010
- Bioinformatics Journal, Oxford University Press
- IV09 - International Symposium on Information Visualization
in Biomedical Informatics (IVBI)
- Austrian Academy of Sciences (Österreichische Akademie der Wissenschaften)
Memberships in professional societies and interest groups
- IEEE Computer Society
- International Society for Computational Biology (ISCB)
- International Association for Development of the Information Society (IADIS)
- Austrian Computer Society (Österreichische Computer Gesellschaft)
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Caleydo Visualization Framework
Visit www.caleydo.org

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iMEDgine - Medical Image Viewer
Visit imedgine.org
iMEDgine is a software that allows visualization and manipulation of
medical 3D image data.
The software itself provides the GUI, basic manipulation functionality
and interfaces to algorithms as implemented in ITK.

- Information Visualization
- Multiple linked views
- High-dimensional / multi-variate data
- Visual analytics / visual data mining / knowledge discovery
- Collaborative visualization / collaborative environments
- Focus + context techniques
- Visual links
- Interaction
- Bioinformatics
- Pathways
- Gene expression data
- Clinical data
Since 2007 I'm co-organizing the ICG
Students' Club.
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